Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAGCCATGGCTGA
...((((((.(((((...(((&)))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193531
GeneSymbolTMEM116
Binding site667,685
Score0.949
Seed0
Au0.5
Energy-17.3
Binding len18
Me-7.99
Phylopstem3.3796141666666664
Phylopflank1.9446716018749997
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure