Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGGTTTATGGCAACTCTGCGTTGAGCCAGT
..(((((...(((((((((...&.))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193535
GeneSymbolFBXL5
Binding site3209,3241
Score0.846
Seed0
Au0.588
Energy-19.6
Binding len17
Me-9.57
Phylopstem4.1428195
Phylopflank5.583671982499999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure