Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGCCGAGGTGCAC
.((((.((.((((..((((((&)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193583
GeneSymbolNRCAM
Binding site3045,3063
Score0.872
Seed0
Au0.456
Energy-19.5
Binding len18
Me-8.343
Phylopstem3.265985666666667
Phylopflank3.766374051125
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure