Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGCAGTGTTGGTCAGC
..(((((..(((.(((((((((&))))))))).)))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193609
GeneSymbolTUBD1
Binding site1291,1312
Score0.846
Seed0
Au0.574
Energy-19.5
Binding len21
Me-9.616
Phylopstem0.5525703444444444
Phylopflank4.014399626249999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure