Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGAAAACACCAGCTGTAT
.((((((((..(((.((((((&))))))..)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354969
GeneSymbolMDM1
Binding site2774,2796
Score0.846
Seed1
Au0.765
Energy-18.9
Binding len22
Me-8.596
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure