Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAATGTTGTCCCACTTCAGATGGTGCTGCAGCAGCAAT
((((.((((((((((((((((&))))))))......................)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193617
GeneSymbolSCP2
Binding site723,767
Score0.846
Seed0
Au0.544
Energy-22.7
Binding len44
Me-8.057
Phylopstem4.225590321052632
Phylopflank2.9702718025
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure