Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCAGAGCGACGGCTGCAAC
(((((((((((.((....(((&)))....)).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193622
GeneSymbolPINLYP
Binding site158,181
Score0.846
Seed1
Au0.456
Energy-20.5
Binding len23
Me-8.253
Phylopstem1.5541113583333335
Phylopflank1.0533336875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure