Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCACAGCCCTGTG
..(((((((.(((((..((((&))))))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193623
GeneSymbolC19orf84
Binding site1194,1214
Score0.846
Seed1
Au0.412
Energy-17.8
Binding len20
Me-6.433
Phylopstem0.25040867777777787
Phylopflank0.14974470374999999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure