Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAATGGTGGCTGTT
..((((((((.((((((....&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193628
GeneSymbolSMIM17
Binding site510,526
Score0.846
Seed1
Au0.735
Energy-18.0
Binding len16
Me-7.782
Phylopstem-0.68775
Phylopflank0.79625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure