Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAGACAACAGCTGCAAG
(((((((((..(((....(((&)))...)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193640
GeneSymbolCRB1
Binding site2480,2501
Score0.923
Seed1
Au0.485
Energy-20.6
Binding len21
Me-8.973
Phylopstem2.5770225222222223
Phylopflank2.73490652875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure