Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGC
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001194955
GeneSymbolMATR3
Binding site575,585
Score0.923
Seed1
Au0.5
Energy-15.9
Binding len10
Me-11.418
Phylopstem5.0100944444444435
Phylopflank4.997041687499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure