Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACTTTCATTTGGAGTTTGAACCCGTTTTGGTTGCAT
.((((((((((((((((((((&))))))))).....................))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194955
GeneSymbolMATR3
Binding site3436,3481
Score0.846
Seed1
Au0.647
Energy-21.3
Binding len45
Me-3.793
Phylopstem1.7343555524999994
Phylopflank2.1920306875
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure