Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGAGCTGCAGCCTGCGGG
((((((((((((((.((....&)).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194958
GeneSymbolKCNJ18
Binding site1951,1970
Score0.923
Seed1
Au0.324
Energy-21.5
Binding len19
Me-4.673
Phylopstem-0.17353660799999998
Phylopflank-0.17305844199999995
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure