Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCGGCCGCGGCAGTT
..((.(((((((((((..(((&))).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194986
GeneSymbolTRABD2B
Binding site1896,1915
Score0.846
Seed0
Au0.368
Energy-22.4
Binding len19
Me-9.076
Phylopstem-0.21453089090909092
Phylopflank0.05637711249999998
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure