Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATCAGCCCCTCCAGCTGCC
..(((((((.(((((..(((.&)))..)))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194990
GeneSymbolMEPCE
Binding site680,702
Score0.846
Seed1
Au0.382
Energy-20.9
Binding len22
Me-6.433
Phylopstem1.0817835714285713
Phylopflank1.3085391725
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure