Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAAAGTCCGTATCAGTTGCAGCTGGAGA
((.((((((((((((...((.&.))....)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330639
GeneSymbolSIRPB1
Binding site172,205
Score0.846
Seed0
Au0.456
Energy-19.6
Binding len23
Me-5.728
Phylopstem0.309017875
Phylopflank-0.06999693000000001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure