Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACGGCTGCCGACGACTGTCAAAGGCTCCGGAGAGAGGACTGCGAG
(((((((((((((((((.(((&))).)))))))))...........................)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194995
GeneSymbolMTRFR
Binding site77,127
Score0.846
Seed1
Au0.353
Energy-20.3
Binding len50
Me-3.938
Phylopstem-0.04209006666666669
Phylopflank0.23537364374999992
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end7
Position5UTR
2D Structure