Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGTTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGGG
...((((((((((((((((((&))))..........................)))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001194999
GeneSymbolMR1
Binding site2051,2099
Score0.846
Seed0
Au0.426
Energy-25.9
Binding len48
Me-6.515
Phylopstem-0.11333076595744676
Phylopflank-0.08216229999999998
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure