Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAGTGGAACTACAGAGACCTGGACCCAGCTGCAC
.((((((((.((((...((((&.)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001194999
GeneSymbolMR1
Binding site1844,1883
Score1.0
Seed1
Au0.559
Energy-23.5
Binding len19
Me-6.004
Phylopstem0.5989266249999999
Phylopflank0.20393173874999992
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure