Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTGGGGCCTGGGGAGCCCACTGAGGGGCCAGG
..((((((((((..(((((...&.)))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354988
GeneSymbolCSK
Binding site1954,1988
Score0.923
Seed1
Au0.25
Energy-27.8
Binding len19
Me-7.103
Phylopstem0.41520470000000004
Phylopflank0.36753550000000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure