Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCGGCCGTGGGAGCCGTGGACGTCATCTGCAGG
(((((((((((((((..((((&))))..)))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195007
GeneSymbolPPIE
Binding site1063,1101
Score0.846
Seed1
Au0.353
Energy-21.2
Binding len38
Me-4.171
Phylopstem4.665039145161291
Phylopflank0.9411683375
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end6
Position3UTR
2D Structure