Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTGCGGCATAGCAAC
((((.(((((((((((.....&)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354988
GeneSymbolCSK
Binding site1154,1173
Score1.0
Seed0
Au0.397
Energy-21.7
Binding len19
Me-8.057
Phylopstem4.092565363636363
Phylopflank4.194367124999999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure