Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCCAGGGAACGGCTATATCGGGCCCAGCTGGAGG
((.((((((.((((((((((.&))))))))))......................)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195059
GeneSymbolPLEKHO2
Binding site1156,1198
Score0.846
Seed0
Au0.382
Energy-22.5
Binding len42
Me-6.738
Phylopstem2.5845504
Phylopflank0.3623098774999999
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure