Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAAAGCCAGCCCCTCCTCCCACCTATTCTGAGTAGCTGCAGA
((((((((((((((...((((&))))...))))........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195059
GeneSymbolPLEKHO2
Binding site1886,1932
Score0.846
Seed1
Au0.397
Energy-21.1
Binding len46
Me-4.906
Phylopstem0.30650666578947366
Phylopflank0.23460966625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure