Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAGATGATTTTGGCAGGACTTGTCTACATGCAGCTGCAGCTGGAGG
((.((((((((((((((..((&.)).)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195098
GeneSymbolANKRD28
Binding site1384,1434
Score0.923
Seed0
Au0.5
Energy-25.6
Binding len22
Me-5.495
Phylopstem4.529752142857142
Phylopflank4.5001865
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure