Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCCGCAGCGTCATTGTTGGTGCAGG
(((((((((((((((...(((&)))))))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195104
GeneSymbolGSR
Binding site700,730
Score0.846
Seed1
Au0.426
Energy-22.1
Binding len30
Me-4.171
Phylopstem0.6770358307692307
Phylopflank0.17290236375
Longest consecutive pairings13
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure