Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGAGCCCAGCTGCAGG
(((((((((.((((....(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195129
GeneSymbolPRSS56
Binding site1232,1252
Score0.846
Seed1
Au0.279
Energy-23.9
Binding len20
Me-6.149
Phylopstem2.4650925777777775
Phylopflank1.40861109
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure