Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCTCATGGTGCTGGGG
.((((((((.....((((((((&)))))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195139
GeneSymbolCOG4
Binding site769,791
Score0.923
Seed1
Au0.456
Energy-20.6
Binding len22
Me-13.353
Phylopstem4.3978985
Phylopflank4.474541567499999
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure