Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGCCTGTAGCTGCC
..((((((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195139
GeneSymbolCOG4
Binding site2307,2323
Score0.846
Seed1
Au0.441
Energy-20.8
Binding len16
Me-6.246
Phylopstem5.7110479
Phylopflank4.87567801
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure