Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCTGGCTGA
...((((((.((((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195139
GeneSymbolCOG4
Binding site323,340
Score0.923
Seed0
Au0.485
Energy-20.2
Binding len17
Me-7.757
Phylopstem-0.24398906666666664
Phylopflank0.025614117500000005
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure