Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCAAGACCGCAGCA
.....(((((((((..(((((&))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195150
GeneSymbolATP6V1FNB
Binding site2130,2150
Score0.923
Seed0
Au0.412
Energy-21.6
Binding len20
Me-14.634
Phylopstem-0.4905273777777776
Phylopflank-0.34530841624999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure