Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCCCACATCCCTCACCTCTGCAGCCTGGGCTGCC
..((((((..(((((((((((&.)))).)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355003
GeneSymbolMMP24OS
Binding site1280,1320
Score0.846
Seed1
Au0.368
Energy-25.5
Binding len22
Me-7.256
Phylopstem-0.5759903591666665
Phylopflank-0.525469999125
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure