Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGGTGTGCCAA
...((((((((..(((((....&))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195192
GeneSymbolEFCAB13
Binding site2925,2940
Score0.846
Seed0
Au0.426
Energy-18.8
Binding len15
Me-11.15
Phylopstem-0.25037822875000004
Phylopflank0.36951658150000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure