Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCTGTAGAGGCT
..((..(((((((((..((((&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195193
GeneSymbolNASP
Binding site973,991
Score0.846
Seed0
Au0.441
Energy-19.6
Binding len18
Me-11.21
Phylopstem0.7236375555555556
Phylopflank0.8762164112500002
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure