Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACGACCGTCTCCTTGCAGAGACCCACTACCAGCTGGGC
.(.(((((((((((((..(((&))).)))))))......................)))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195193
GeneSymbolNASP
Binding site1645,1687
Score0.923
Seed0
Au0.456
Energy-18.6
Binding len42
Me-5.351
Phylopstem1.0137616717142857
Phylopflank0.5734178965
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure