Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGGGGCGCTGTACACCGCGGCCGTCGCGGCTTTTGTGCTGTACAAGTGTTTGCAGG
((((((((((((.((((.(((&.))).))))))))))).............................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195201
GeneSymbolCCDC107
Binding site285,347
Score0.846
Seed1
Au0.441
Energy-20.4
Binding len51
Me-5.227
Phylopstem1.766172292682926
Phylopflank1.0610861575000001
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure