Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATTGCATGCAGCTGTT
..(((((((((..(((((((.&)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195214
GeneSymbolYIPF6
Binding site4051,4069
Score1.0
Seed1
Au0.632
Energy-19.9
Binding len18
Me-9.593
Phylopstem0.24557466666666666
Phylopflank0.52937734425
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure