Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGCGCGGCCGGGCTGCGGG
((((((((.(((((((.(((.&)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195215
GeneSymbolDENND1B
Binding site249,271
Score1.0
Seed1
Au0.132
Energy-23.8
Binding len22
Me-4.994
Phylopstem0.38396535825
Phylopflank0.19842664954999994
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure