Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCGCTGTCCGGGG
.(((((...(((.(((((((..&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195217
GeneSymbolCCDC107
Binding site135,152
Score0.846
Seed0
Au0.324
Energy-16.7
Binding len17
Me-9.996
Phylopstem0.5167672857142857
Phylopflank0.3882174999999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure