Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAGGACAGCAAGGAGCTGCAGC
((((((((.(.(((((.....&.)))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195228
GeneSymbolPIMREG
Binding site134,160
Score1.0
Seed1
Au0.397
Energy-20.0
Binding len19
Me-7.819
Phylopstem-0.20564537499999996
Phylopflank0.43821276
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure