Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGCTTCCATTGGCCGGGTG
(((((((...(((((.......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195243
GeneSymbolSMKR1
Binding site439,460
Score0.846
Seed1
Au0.426
Energy-15.8
Binding len14
Me-8.783
Phylopstem2.3413431428571427
Phylopflank2.308477585
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure