Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGGTGAGCGTTCGGCCGAGGCTGCT
..((((((.((((((.((.((&.)).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195249
GeneSymbolAPTX
Binding site106,136
Score0.904
Seed1
Au0.382
Energy-22.5
Binding len20
Me-6.246
Phylopstem-0.46485796666666657
Phylopflank0.21909047487500005
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure