Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGCCTCAAGCTGCGC
.((((((((.(((((.(((..&.)))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195261
GeneSymbolPDE4DIP
Binding site92,112
Score0.923
Seed1
Au0.485
Energy-20.6
Binding len20
Me-5.269
Phylopstem4.064215555555555
Phylopflank4.26246992
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure