Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACACCCAGTGAAACAAGAGGCCACCCTGTCCCCAGCCGCACCTGCAC
.(((((.((((((((..(((.&.))).....)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195278
GeneSymbolTMEM178B
Binding site1815,1867
Score0.923
Seed0
Au0.368
Energy-23.8
Binding len24
Me-5.57
Phylopstem1.6568417625
Phylopflank1.4322771162499999
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure