Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCAGCTGCAGG
(((((((((((((....((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195302
GeneSymbolUSB1
Binding site1985,2003
Score0.923
Seed1
Au0.338
Energy-26.3
Binding len18
Me-5.763
Phylopstem-0.2980433923076923
Phylopflank-0.3048547399999999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure