Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAATGCAGCTAGATGTAAA
((((((((((.((((((((..&))))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195303
GeneSymbolRGS5
Binding site4287,4310
Score0.885
Seed1
Au0.662
Energy-19.4
Binding len23
Me-6.762
Phylopstem0.12487699285714286
Phylopflank0.08091720749999992
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure