Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTAAAGCTGCAGCA
.....(((((((((.((((..&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195306
GeneSymbolBBIP1
Binding site581,596
Score0.923
Seed0
Au0.588
Energy-18.7
Binding len15
Me-14.401
Phylopstem0.26817796666666666
Phylopflank-0.0016992425000000103
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure