Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCGCCCGTGCCCCAGGGAATGCTTATTTTTGACCTTAGTTGCAAA
(((((((((.(((((((((..&.)))))....)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195306
GeneSymbolBBIP1
Binding site466,517
Score0.846
Seed1
Au0.574
Energy-19.2
Binding len25
Me-5.18
Phylopstem0.18817810000000001
Phylopflank0.3135945725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure