Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCCGGGGTTGAACAAACGGAAAGTGCCAGGA
.((((((((....(((......&.)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195308
GeneSymbolCGGBP1
Binding site363,397
Score0.923
Seed1
Au0.471
Energy-16.1
Binding len17
Me-12.497
Phylopstem0.67564997
Phylopflank0.8118924017500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure