Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCCATGGTGCTGCAGCTGTC
..(((((((((((((..((((&))))...))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355015
GeneSymbolTJP1
Binding site3844,3869
Score0.846
Seed1
Au0.471
Energy-21.2
Binding len25
Me-5.19
Phylopstem1.5013433176470588
Phylopflank2.5715086449999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure